Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp4cQ9D7F7 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp4cQ9D7F7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp4cQ9D7F7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chmp4cQ9D7F7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Chmp4cQ9D7F7 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Gm11025-201ENSMUST00000140773 466 ntBASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Mir8117-201ENSMUST00000184773 107 ntBASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chmp4cQ9D7F7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Gm11745-201ENSMUST00000121669 448 ntBASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Gm25911-201ENSMUST00000157621 56 ntBASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Chmp4cQ9D7F7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Gm42928-201ENSMUST00000197338 3339 ntBASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Chmp4cQ9D7F7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Gm11594-201ENSMUST00000122313 162 ntBASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Chmp4cQ9D7F7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms