Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm18246-201ENSMUST00000221023 728 ntBASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim42Q9D2H5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Gm11764-201ENSMUST00000120221 623 ntBASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Gm6089-201ENSMUST00000197666 938 ntBASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Gm2451-201ENSMUST00000199447 999 ntBASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Gm10290-201ENSMUST00000200451 999 ntBASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim42Q9D2H5 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Gm7222-201ENSMUST00000117512 906 ntBASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim42Q9D2H5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.1□□□□□ -0.15
Trim42Q9D2H5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms