Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nip7Q9CXK8 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Gm29127-201ENSMUST00000188304 517 ntBASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.47■□□□□ 0.39
Nip7Q9CXK8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Gm29649-201ENSMUST00000185649 419 ntBASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Gm42693-201ENSMUST00000196779 631 ntBASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Gm38671-201ENSMUST00000200573 130 ntBASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.46■□□□□ 0.39
Nip7Q9CXK8 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Gm10012-201ENSMUST00000078252 192 ntBASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Gm10478-201ENSMUST00000084451 396 ntBASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nip7Q9CXK8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nip7Q9CXK8 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Gm15371-201ENSMUST00000117057 784 ntBASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Gm17420-201ENSMUST00000164753 153 ntBASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.45■□□□□ 0.38
Nip7Q9CXK8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nip7Q9CXK8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nip7Q9CXK8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nip7Q9CXK8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nip7Q9CXK8 Gm13612-201ENSMUST00000119276 390 ntBASIC17.44■□□□□ 0.38
Nip7Q9CXK8 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nip7Q9CXK8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC17.44■□□□□ 0.38
Nip7Q9CXK8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Nip7Q9CXK8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Nip7Q9CXK8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nip7Q9CXK8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nip7Q9CXK8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nip7Q9CXK8 Gm38223-201ENSMUST00000194484 695 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms