Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhac1Q91Y10 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Gm24513-201ENSMUST00000174964 138 ntBASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Gm37935-201ENSMUST00000192012 982 ntBASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Gm37230-201ENSMUST00000194491 818 ntBASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pcdhac1Q91Y10 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.21□□□□□ -0.3
Pcdhac1Q91Y10 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.21□□□□□ -0.3
Pcdhac1Q91Y10 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhac1Q91Y10 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhac1Q91Y10 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pcdhac1Q91Y10 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Pcdhac1Q91Y10 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.21□□□□□ -0.3
Pcdhac1Q91Y10 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.21□□□□□ -0.3
Pcdhac1Q91Y10 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Gm4995-201ENSMUST00000117247 432 ntBASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Gm27397-201ENSMUST00000184997 107 ntBASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pcdhac1Q91Y10 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.19□□□□□ -0.3
Pcdhac1Q91Y10 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms