Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.1■□□□□ 0.17
Trex1Q91XB0 Gm17794-201ENSMUST00000220252 955 ntBASIC16.1■□□□□ 0.17
Trex1Q91XB0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trex1Q91XB0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.09■□□□□ 0.17
Trex1Q91XB0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC16.09■□□□□ 0.17
Trex1Q91XB0 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.09■□□□□ 0.17
Trex1Q91XB0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Gm12390-201ENSMUST00000117897 397 ntBASIC16.09■□□□□ 0.17
Trex1Q91XB0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Gm27772-201ENSMUST00000184900 187 ntBASIC16.09■□□□□ 0.17
Trex1Q91XB0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.09■□□□□ 0.17
Trex1Q91XB0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Gm21038-201ENSMUST00000222205 1383 ntBASIC16.09■□□□□ 0.17
Trex1Q91XB0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trex1Q91XB0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trex1Q91XB0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trex1Q91XB0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trex1Q91XB0 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trex1Q91XB0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trex1Q91XB0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trex1Q91XB0 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trex1Q91XB0 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trex1Q91XB0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trex1Q91XB0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trex1Q91XB0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Trex1Q91XB0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trex1Q91XB0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
Trex1Q91XB0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.08■□□□□ 0.16
Trex1Q91XB0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.08■□□□□ 0.16
Trex1Q91XB0 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.08■□□□□ 0.16
Trex1Q91XB0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.08■□□□□ 0.16
Trex1Q91XB0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Trex1Q91XB0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trex1Q91XB0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.07■□□□□ 0.16
Trex1Q91XB0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Gm12928-201ENSMUST00000117115 573 ntBASIC16.07■□□□□ 0.16
Trex1Q91XB0 Gm12485-201ENSMUST00000119641 291 ntBASIC16.07■□□□□ 0.16
Trex1Q91XB0 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trex1Q91XB0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms