Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.4■□□□□ 0.22
StrcQ8VIM6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.4■□□□□ 0.22
StrcQ8VIM6 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.4■□□□□ 0.22
StrcQ8VIM6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC16.4■□□□□ 0.22
StrcQ8VIM6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
StrcQ8VIM6 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
StrcQ8VIM6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Gm23270-201ENSMUST00000104055 131 ntBASIC16.39■□□□□ 0.21
StrcQ8VIM6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Gm14130-201ENSMUST00000118417 987 ntBASIC16.39■□□□□ 0.21
StrcQ8VIM6 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC16.39■□□□□ 0.21
StrcQ8VIM6 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
StrcQ8VIM6 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.39■□□□□ 0.21
StrcQ8VIM6 Gm4768-201ENSMUST00000206199 686 ntBASIC16.39■□□□□ 0.21
StrcQ8VIM6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.39■□□□□ 0.21
StrcQ8VIM6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
StrcQ8VIM6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
StrcQ8VIM6 AA914427-201ENSMUST00000193194 1166 ntBASIC16.38■□□□□ 0.21
StrcQ8VIM6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.38■□□□□ 0.21
StrcQ8VIM6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
StrcQ8VIM6 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.38■□□□□ 0.21
StrcQ8VIM6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Gm13665-201ENSMUST00000120830 528 ntBASIC16.38■□□□□ 0.21
StrcQ8VIM6 Gm2231-201ENSMUST00000125661 612 ntBASIC16.38■□□□□ 0.21
StrcQ8VIM6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.38■□□□□ 0.21
StrcQ8VIM6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.37■□□□□ 0.21
StrcQ8VIM6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Gm14263-201ENSMUST00000117955 746 ntBASIC16.37■□□□□ 0.21
StrcQ8VIM6 Gm26185-201ENSMUST00000157692 266 ntBASIC16.37■□□□□ 0.21
StrcQ8VIM6 Gm37986-201ENSMUST00000193285 383 ntBASIC16.37■□□□□ 0.21
StrcQ8VIM6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.37■□□□□ 0.21
StrcQ8VIM6 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Gm19163-201ENSMUST00000223313 780 ntBASIC16.37■□□□□ 0.21
StrcQ8VIM6 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
StrcQ8VIM6 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms