Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.86□□□□□ -0.35
Ebf4Q8K4J2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Gm15372-201ENSMUST00000120729 834 ntBASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Gm5682-201ENSMUST00000173402 505 ntBASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ebf4Q8K4J2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Gm18246-201ENSMUST00000221023 728 ntBASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ebf4Q8K4J2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf4Q8K4J2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf4Q8K4J2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf4Q8K4J2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf4Q8K4J2 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.83□□□□□ -0.35
Ebf4Q8K4J2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf4Q8K4J2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ebf4Q8K4J2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf4Q8K4J2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ebf4Q8K4J2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf4Q8K4J2 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf4Q8K4J2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf4Q8K4J2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ebf4Q8K4J2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms