Protein–RNA interactions for Protein: Q8K441

Abca6, ATP-binding cassette sub-family A member 6, mousemouse

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca6Q8K441 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Abca6Q8K441 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.7■□□□□ 0.74
Abca6Q8K441 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Abca6Q8K441 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Gm44645-201ENSMUST00000205492 1653 ntBASIC19.7■□□□□ 0.74
Abca6Q8K441 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC19.7■□□□□ 0.74
Abca6Q8K441 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abca6Q8K441 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm24830-201ENSMUST00000102024 166 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Abca6Q8K441 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Mir5120-201ENSMUST00000175020 78 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm25890-201ENSMUST00000177643 165 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Rnu1b2-201ENSMUST00000178073 165 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Rnu1b1-201ENSMUST00000178250 165 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm22614-201ENSMUST00000178300 165 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm2260-201ENSMUST00000184965 657 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC19.69■□□□□ 0.74
Abca6Q8K441 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm22042-201ENSMUST00000082989 165 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm26232-201ENSMUST00000083360 166 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm24136-201ENSMUST00000083374 165 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Rnu1b6-201ENSMUST00000083839 166 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm26110-201ENSMUST00000083971 165 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Abca6Q8K441 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Abca6Q8K441 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Abca6Q8K441 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm25732-201ENSMUST00000175168 60 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm17330-201ENSMUST00000221047 165 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 AC131997.1-201ENSMUST00000228611 1229 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Rn7sk-201ENSMUST00000083103 331 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Gm26315-201ENSMUST00000083890 321 ntBASIC19.69■□□□□ 0.74
Abca6Q8K441 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abca6Q8K441 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Abca6Q8K441 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 Gm14350-201ENSMUST00000116642 640 ntBASIC19.68■□□□□ 0.74
Abca6Q8K441 Gm12012-201ENSMUST00000118857 1066 ntBASIC19.68■□□□□ 0.74
Abca6Q8K441 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC19.68■□□□□ 0.74
Abca6Q8K441 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Abca6Q8K441 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Abca6Q8K441 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Abca6Q8K441 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC19.67■□□□□ 0.74
Abca6Q8K441 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Abca6Q8K441 Gm20632-201ENSMUST00000176760 2427 ntBASIC19.67■□□□□ 0.74
Abca6Q8K441 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abca6Q8K441 Gm44981-201ENSMUST00000205549 1943 ntBASIC19.66■□□□□ 0.74
Abca6Q8K441 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abca6Q8K441 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms