Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim50Q810I2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim50Q810I2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.76□□□□□ -0.21
Trim50Q810I2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim50Q810I2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim50Q810I2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.76□□□□□ -0.21
Trim50Q810I2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim50Q810I2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim50Q810I2 Gm28630-201ENSMUST00000187806 498 ntBASIC13.76□□□□□ -0.21
Trim50Q810I2 AA619741-201ENSMUST00000195095 646 ntBASIC13.76□□□□□ -0.21
Trim50Q810I2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim50Q810I2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim50Q810I2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
Trim50Q810I2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim50Q810I2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim50Q810I2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.75□□□□□ -0.21
Trim50Q810I2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.75□□□□□ -0.21
Trim50Q810I2 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Trim50Q810I2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.75□□□□□ -0.21
Trim50Q810I2 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.75□□□□□ -0.21
Trim50Q810I2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Gm15957-201ENSMUST00000118893 974 ntBASIC13.75□□□□□ -0.21
Trim50Q810I2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim50Q810I2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
Trim50Q810I2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim50Q810I2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim50Q810I2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trim50Q810I2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.74□□□□□ -0.21
Trim50Q810I2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.74□□□□□ -0.21
Trim50Q810I2 Mir125a-201ENSMUST00000083545 68 ntBASIC13.74□□□□□ -0.21
Trim50Q810I2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim50Q810I2 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms