Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Gm8000-201ENSMUST00000188378 592 ntBASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Gm5264-201ENSMUST00000190584 848 ntBASIC15.09■□□□□ 0.01
Nucks1Q80XU3 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.09■□□□□ 0.01
Nucks1Q80XU3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Nucks1Q80XU3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
Nucks1Q80XU3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nucks1Q80XU3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0.01
Nucks1Q80XU3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nucks1Q80XU3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nucks1Q80XU3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nucks1Q80XU3 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nucks1Q80XU3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.08■□□□□ 0.01
Nucks1Q80XU3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Nucks1Q80XU3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.08■□□□□ 0
Nucks1Q80XU3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.08■□□□□ 0
Nucks1Q80XU3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm29310-201ENSMUST00000185468 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21825-201ENSMUST00000185728 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm29109-201ENSMUST00000185895 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21896-201ENSMUST00000186520 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21873-201ENSMUST00000186728 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21794-201ENSMUST00000187056 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21880-201ENSMUST00000187275 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21826-201ENSMUST00000187451 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21198-201ENSMUST00000188393 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21749-201ENSMUST00000189343 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21901-201ENSMUST00000189568 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm29424-201ENSMUST00000189716 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm28599-201ENSMUST00000189838 694 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21867-201ENSMUST00000189917 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm29269-201ENSMUST00000190087 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21722-201ENSMUST00000190153 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm28423-201ENSMUST00000190701 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21899-201ENSMUST00000190745 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21910-201ENSMUST00000191163 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21849-201ENSMUST00000191571 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm28678-201ENSMUST00000191593 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm20910-201ENSMUST00000193268 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm21871-201ENSMUST00000194621 696 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.08■□□□□ 0
Nucks1Q80XU3 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.08■□□□□ 0
Nucks1Q80XU3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.08■□□□□ 0
Nucks1Q80XU3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Nucks1Q80XU3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Nucks1Q80XU3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.08■□□□□ 0
Nucks1Q80XU3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Nucks1Q80XU3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Nucks1Q80XU3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Nucks1Q80XU3 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nucks1Q80XU3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nucks1Q80XU3 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.07■□□□□ 0
Nucks1Q80XU3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nucks1Q80XU3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nucks1Q80XU3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Nucks1Q80XU3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nucks1Q80XU3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Nucks1Q80XU3 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.07■□□□□ 0
Nucks1Q80XU3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Nucks1Q80XU3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nucks1Q80XU3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.07■□□□□ 0
Nucks1Q80XU3 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.07■□□□□ 0
Nucks1Q80XU3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms