Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh8Q7TSK3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 BC001981-202ENSMUST00000191393 1545 ntBASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh8Q7TSK3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Gm15393-201ENSMUST00000120499 219 ntBASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh8Q7TSK3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh8Q7TSK3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdh8Q7TSK3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh8Q7TSK3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms