Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf220Q6PDX6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Gm6296-201ENSMUST00000222599 943 ntBASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf220Q6PDX6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Gm11780-201ENSMUST00000136880 516 ntBASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Gm4535-201ENSMUST00000182274 558 ntBASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Gm10355-201ENSMUST00000097146 517 ntBASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf220Q6PDX6 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms