Protein–RNA interactions for Protein: Q6P4S6

Sik3, Serine/threonine-protein kinase SIK3, mousemouse

Predictions only

Length 1,311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sik3Q6P4S6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sik3Q6P4S6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Gm21470-201ENSMUST00000187680 696 ntBASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.75■□□□□ 0.27
Sik3Q6P4S6 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.75■□□□□ 0.27
Sik3Q6P4S6 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Gm17795-201ENSMUST00000214505 757 ntBASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.74■□□□□ 0.27
Sik3Q6P4S6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.74■□□□□ 0.27
Sik3Q6P4S6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.73■□□□□ 0.27
Sik3Q6P4S6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Gm5356-201ENSMUST00000093326 615 ntBASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sik3Q6P4S6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms