Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VclQ64727 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VclQ64727 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VclQ64727 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VclQ64727 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VclQ64727 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VclQ64727 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VclQ64727 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VclQ64727 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VclQ64727 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
VclQ64727 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
VclQ64727 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VclQ64727 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
VclQ64727 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VclQ64727 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VclQ64727 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.88□□□□□ -0.19
VclQ64727 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.88□□□□□ -0.19
VclQ64727 Gm9063-201ENSMUST00000223299 582 ntBASIC13.88□□□□□ -0.19
VclQ64727 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
VclQ64727 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.88□□□□□ -0.19
VclQ64727 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VclQ64727 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VclQ64727 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
VclQ64727 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.87□□□□□ -0.19
VclQ64727 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VclQ64727 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
VclQ64727 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VclQ64727 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VclQ64727 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.87□□□□□ -0.19
VclQ64727 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.87□□□□□ -0.19
VclQ64727 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.87□□□□□ -0.19
VclQ64727 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.87□□□□□ -0.19
VclQ64727 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.87□□□□□ -0.19
VclQ64727 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.87□□□□□ -0.19
VclQ64727 Gm27321-201ENSMUST00000185021 205 ntBASIC13.87□□□□□ -0.19
VclQ64727 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.87□□□□□ -0.19
VclQ64727 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VclQ64727 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.87□□□□□ -0.19
VclQ64727 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VclQ64727 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.86□□□□□ -0.19
VclQ64727 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.86□□□□□ -0.19
VclQ64727 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
VclQ64727 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.86□□□□□ -0.19
VclQ64727 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Gm12151-201ENSMUST00000121374 290 ntBASIC13.86□□□□□ -0.19
VclQ64727 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.86□□□□□ -0.19
VclQ64727 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VclQ64727 Gm33320-201ENSMUST00000192232 530 ntBASIC13.86□□□□□ -0.19
VclQ64727 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VclQ64727 Gm44608-201ENSMUST00000206827 855 ntBASIC13.86□□□□□ -0.19
VclQ64727 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.86□□□□□ -0.19
VclQ64727 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms