Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Vsx2Q61412 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.79□□□□□ -0.2
Vsx2Q61412 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.79□□□□□ -0.2
Vsx2Q61412 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vsx2Q61412 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Vsx2Q61412 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vsx2Q61412 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vsx2Q61412 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vsx2Q61412 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.78□□□□□ -0.2
Vsx2Q61412 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Vsx2Q61412 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vsx2Q61412 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.78□□□□□ -0.2
Vsx2Q61412 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.78□□□□□ -0.2
Vsx2Q61412 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Gm25925-201ENSMUST00000158314 306 ntBASIC13.78□□□□□ -0.2
Vsx2Q61412 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Gm37230-201ENSMUST00000194491 818 ntBASIC13.78□□□□□ -0.2
Vsx2Q61412 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Vsx2Q61412 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vsx2Q61412 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Vsx2Q61412 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Vsx2Q61412 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vsx2Q61412 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vsx2Q61412 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vsx2Q61412 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vsx2Q61412 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Gm29541-201ENSMUST00000191351 678 ntBASIC13.77□□□□□ -0.21
Vsx2Q61412 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.77□□□□□ -0.21
Vsx2Q61412 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vsx2Q61412 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vsx2Q61412 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx2Q61412 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx2Q61412 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vsx2Q61412 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
Vsx2Q61412 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Vsx2Q61412 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Vsx2Q61412 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx2Q61412 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vsx2Q61412 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Vsx2Q61412 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx2Q61412 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx2Q61412 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx2Q61412 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx2Q61412 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.76□□□□□ -0.21
Vsx2Q61412 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Vsx2Q61412 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.76□□□□□ -0.21
Vsx2Q61412 AA543401-201ENSMUST00000164248 1269 ntBASIC13.76□□□□□ -0.21
Vsx2Q61412 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.76□□□□□ -0.21
Vsx2Q61412 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx2Q61412 Gm18766-201ENSMUST00000189811 808 ntBASIC13.76□□□□□ -0.21
Vsx2Q61412 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx2Q61412 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx2Q61412 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vsx2Q61412 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms