Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Gm44608-201ENSMUST00000206827 855 ntBASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Tnfaip3Q60769 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.28□□□□□ -0.28
Tnfaip3Q60769 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfaip3Q60769 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfaip3Q60769 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfaip3Q60769 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfaip3Q60769 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfaip3Q60769 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfaip3Q60769 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfaip3Q60769 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.27□□□□□ -0.28
Tnfaip3Q60769 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfaip3Q60769 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfaip3Q60769 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Tnfaip3Q60769 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.27□□□□□ -0.28
Tnfaip3Q60769 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Tnfaip3Q60769 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Syt7-204ENSMUST00000223586 1344 ntBASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.27□□□□□ -0.29
Tnfaip3Q60769 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Gm15460-201ENSMUST00000118147 391 ntBASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Gm23547-201ENSMUST00000158210 271 ntBASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Gm7063-201ENSMUST00000186840 981 ntBASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Tnfaip3Q60769 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms