Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Usp30Q3UN04 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.16□□□□□ -0.14
Usp30Q3UN04 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Gm43438-201ENSMUST00000198133 379 ntBASIC14.15□□□□□ -0.14
Usp30Q3UN04 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Gm18307-201ENSMUST00000206864 949 ntBASIC14.15□□□□□ -0.14
Usp30Q3UN04 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.15□□□□□ -0.14
Usp30Q3UN04 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.15□□□□□ -0.14
Usp30Q3UN04 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Usp30Q3UN04 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.14□□□□□ -0.15
Usp30Q3UN04 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.14□□□□□ -0.15
Usp30Q3UN04 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.14□□□□□ -0.15
Usp30Q3UN04 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.14□□□□□ -0.15
Usp30Q3UN04 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.14□□□□□ -0.15
Usp30Q3UN04 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.14□□□□□ -0.15
Usp30Q3UN04 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.14□□□□□ -0.15
Usp30Q3UN04 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.14□□□□□ -0.15
Usp30Q3UN04 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp30Q3UN04 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Efs-202ENSMUST00000227037 2540 ntBASIC14.13□□□□□ -0.15
Usp30Q3UN04 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.13□□□□□ -0.15
Usp30Q3UN04 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.13□□□□□ -0.15
Usp30Q3UN04 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.13□□□□□ -0.15
Usp30Q3UN04 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Gm8602-201ENSMUST00000184045 607 ntBASIC14.13□□□□□ -0.15
Usp30Q3UN04 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp30Q3UN04 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms