Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Gm15957-201ENSMUST00000118893 974 ntBASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.3□□□□□ -0.28
Brf2Q3UAW9 AA619741-201ENSMUST00000195095 646 ntBASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Brf2Q3UAW9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Gm13015-201ENSMUST00000118674 204 ntBASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Gm44335-201ENSMUST00000196879 141 ntBASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Gm44297-201ENSMUST00000198304 141 ntBASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Gm44346-201ENSMUST00000198851 141 ntBASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Brf2Q3UAW9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Gm13823-201ENSMUST00000119930 345 ntBASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Brf2Q3UAW9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms