Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lins1Q3U1D0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Gm37748-201ENSMUST00000194379 1140 ntBASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Gm25857-201ENSMUST00000082788 129 ntBASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
Lins1Q3U1D0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.74■□□□□ 0.27
Lins1Q3U1D0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lins1Q3U1D0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Gm4804-201ENSMUST00000182234 999 ntBASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lins1Q3U1D0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms