Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43aQ3TL54 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Grk6-205ENSMUST00000224653 2976 ntBASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Gm5867-201ENSMUST00000063197 592 ntBASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43aQ3TL54 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43aQ3TL54 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43aQ3TL54 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.96□□□□□ -0.02
Trim43aQ3TL54 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43aQ3TL54 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43aQ3TL54 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Trim43aQ3TL54 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.95□□□□□ -0.02
Trim43aQ3TL54 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Gm14494-201ENSMUST00000118786 435 ntBASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.95□□□□□ -0.02
Trim43aQ3TL54 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim43aQ3TL54 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms