Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.81□□□□□ -0.2
Col9a1Q05722 AC139323.1-201ENSMUST00000223370 1040 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Gm8894-201ENSMUST00000074642 666 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Col9a1Q05722 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Col9a1Q05722 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.81□□□□□ -0.2
Col9a1Q05722 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col9a1Q05722 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.8□□□□□ -0.2
Col9a1Q05722 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col9a1Q05722 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Gm4732-201ENSMUST00000118778 473 ntBASIC13.8□□□□□ -0.2
Col9a1Q05722 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col9a1Q05722 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.8□□□□□ -0.2
Col9a1Q05722 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.8□□□□□ -0.2
Col9a1Q05722 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col9a1Q05722 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col9a1Q05722 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col9a1Q05722 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Gm8213-201ENSMUST00000118191 441 ntBASIC13.79□□□□□ -0.2
Col9a1Q05722 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Gm16379-201ENSMUST00000161469 348 ntBASIC13.79□□□□□ -0.2
Col9a1Q05722 Mir3060-201ENSMUST00000175339 83 ntBASIC13.79□□□□□ -0.2
Col9a1Q05722 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Gm37857-201ENSMUST00000191784 1199 ntBASIC13.79□□□□□ -0.2
Col9a1Q05722 Gm8762-201ENSMUST00000193486 339 ntBASIC13.79□□□□□ -0.2
Col9a1Q05722 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.79□□□□□ -0.2
Col9a1Q05722 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Gm18473-201ENSMUST00000220543 868 ntBASIC13.79□□□□□ -0.2
Col9a1Q05722 Gm14005-208ENSMUST00000223654 681 ntBASIC13.79□□□□□ -0.2
Col9a1Q05722 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.79□□□□□ -0.2
Col9a1Q05722 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.79□□□□□ -0.2
Col9a1Q05722 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.79□□□□□ -0.2
Col9a1Q05722 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col9a1Q05722 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Col9a1Q05722 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms