Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Gm43703-201ENSMUST00000200523 763 ntBASIC13.35□□□□□ -0.27
Nkx3-2P97503 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Gm7730-201ENSMUST00000212486 454 ntBASIC13.35□□□□□ -0.27
Nkx3-2P97503 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.35□□□□□ -0.27
Nkx3-2P97503 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nkx3-2P97503 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.35□□□□□ -0.27
Nkx3-2P97503 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.34□□□□□ -0.27
Nkx3-2P97503 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.34□□□□□ -0.27
Nkx3-2P97503 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.34□□□□□ -0.27
Nkx3-2P97503 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.34□□□□□ -0.27
Nkx3-2P97503 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Nkx3-2P97503 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Gm46209-201ENSMUST00000217912 553 ntBASIC13.34□□□□□ -0.27
Nkx3-2P97503 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.34□□□□□ -0.27
Nkx3-2P97503 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.34□□□□□ -0.27
Nkx3-2P97503 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx3-2P97503 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Nkx3-2P97503 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx3-2P97503 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.33□□□□□ -0.27
Nkx3-2P97503 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.33□□□□□ -0.27
Nkx3-2P97503 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.27
Nkx3-2P97503 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx3-2P97503 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Nkx3-2P97503 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Nkx3-2P97503 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.33□□□□□ -0.28
Nkx3-2P97503 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Gm7488-201ENSMUST00000117148 684 ntBASIC13.33□□□□□ -0.28
Nkx3-2P97503 Gm15321-201ENSMUST00000121290 288 ntBASIC13.33□□□□□ -0.28
Nkx3-2P97503 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Gm9229-201ENSMUST00000222777 126 ntBASIC13.33□□□□□ -0.28
Nkx3-2P97503 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.33□□□□□ -0.28
Nkx3-2P97503 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.33□□□□□ -0.28
Nkx3-2P97503 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nkx3-2P97503 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Nkx3-2P97503 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms