Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SgcbP82349 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.59□□□□□ -0.39
SgcbP82349 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
SgcbP82349 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SgcbP82349 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
SgcbP82349 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.59□□□□□ -0.39
SgcbP82349 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SgcbP82349 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SgcbP82349 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
SgcbP82349 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SgcbP82349 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SgcbP82349 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SgcbP82349 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
SgcbP82349 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SgcbP82349 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SgcbP82349 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SgcbP82349 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SgcbP82349 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SgcbP82349 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Gm12151-201ENSMUST00000121374 290 ntBASIC12.58□□□□□ -0.4
SgcbP82349 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.58□□□□□ -0.4
SgcbP82349 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SgcbP82349 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Gm27680-201ENSMUST00000184192 160 ntBASIC12.58□□□□□ -0.4
SgcbP82349 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.58□□□□□ -0.4
SgcbP82349 Gm33320-201ENSMUST00000192232 530 ntBASIC12.58□□□□□ -0.4
SgcbP82349 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.58□□□□□ -0.4
SgcbP82349 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Gm6916-202ENSMUST00000205523 195 ntBASIC12.58□□□□□ -0.4
SgcbP82349 Gm9229-201ENSMUST00000222777 126 ntBASIC12.58□□□□□ -0.4
SgcbP82349 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.58□□□□□ -0.4
SgcbP82349 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.58□□□□□ -0.4
SgcbP82349 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.58□□□□□ -0.4
SgcbP82349 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SgcbP82349 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SgcbP82349 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SgcbP82349 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SgcbP82349 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SgcbP82349 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.57□□□□□ -0.4
SgcbP82349 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Gm27306-201ENSMUST00000183970 107 ntBASIC12.57□□□□□ -0.4
SgcbP82349 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.57□□□□□ -0.4
SgcbP82349 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
SgcbP82349 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.57□□□□□ -0.4
SgcbP82349 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SgcbP82349 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms