Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.77□□□□□ -0.53
Pdlim4P70271 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pdlim4P70271 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.77□□□□□ -0.53
Pdlim4P70271 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.77□□□□□ -0.53
Pdlim4P70271 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Pdlim4P70271 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pdlim4P70271 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pdlim4P70271 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.76□□□□□ -0.53
Pdlim4P70271 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Gm13616-201ENSMUST00000120600 222 ntBASIC11.76□□□□□ -0.53
Pdlim4P70271 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pdlim4P70271 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pdlim4P70271 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pdlim4P70271 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.75□□□□□ -0.53
Pdlim4P70271 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.75□□□□□ -0.53
Pdlim4P70271 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pdlim4P70271 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pdlim4P70271 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pdlim4P70271 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm6415-201ENSMUST00000118488 348 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm6222-201ENSMUST00000120787 396 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm10275-202ENSMUST00000168697 495 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm22175-201ENSMUST00000175007 78 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pdlim4P70271 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm29310-201ENSMUST00000185468 696 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm21825-201ENSMUST00000185728 696 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm29109-201ENSMUST00000185895 696 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm21896-201ENSMUST00000186520 696 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm21873-201ENSMUST00000186728 696 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm21794-201ENSMUST00000187056 696 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm21880-201ENSMUST00000187275 696 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm21826-201ENSMUST00000187451 696 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm21198-201ENSMUST00000188393 696 ntBASIC11.75□□□□□ -0.53
Pdlim4P70271 Gm21749-201ENSMUST00000189343 696 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms