Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vbp1P61759 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Vbp1P61759 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vbp1P61759 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.78□□□□□ -0.36
Vbp1P61759 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.78□□□□□ -0.36
Vbp1P61759 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Vbp1P61759 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.78□□□□□ -0.36
Vbp1P61759 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.78□□□□□ -0.36
Vbp1P61759 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.78□□□□□ -0.36
Vbp1P61759 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.78□□□□□ -0.36
Vbp1P61759 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.78□□□□□ -0.36
Vbp1P61759 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.78□□□□□ -0.36
Vbp1P61759 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.78□□□□□ -0.36
Vbp1P61759 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vbp1P61759 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vbp1P61759 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vbp1P61759 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vbp1P61759 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vbp1P61759 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vbp1P61759 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.77□□□□□ -0.36
Vbp1P61759 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vbp1P61759 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.77□□□□□ -0.36
Vbp1P61759 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Vbp1P61759 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.77□□□□□ -0.36
Vbp1P61759 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vbp1P61759 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vbp1P61759 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vbp1P61759 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Vbp1P61759 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.77□□□□□ -0.37
Vbp1P61759 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.77□□□□□ -0.37
Vbp1P61759 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.77□□□□□ -0.37
Vbp1P61759 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.77□□□□□ -0.37
Vbp1P61759 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vbp1P61759 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
Vbp1P61759 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vbp1P61759 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vbp1P61759 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.77□□□□□ -0.37
Vbp1P61759 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.77□□□□□ -0.37
Vbp1P61759 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.77□□□□□ -0.37
Vbp1P61759 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.77□□□□□ -0.37
Vbp1P61759 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vbp1P61759 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vbp1P61759 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.76□□□□□ -0.37
Vbp1P61759 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vbp1P61759 Gm27867-201ENSMUST00000184778 125 ntBASIC12.76□□□□□ -0.37
Vbp1P61759 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.76□□□□□ -0.37
Vbp1P61759 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Gm18032-201ENSMUST00000222541 538 ntBASIC12.76□□□□□ -0.37
Vbp1P61759 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Vbp1P61759 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vbp1P61759 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms