Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pdx1P52946 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pdx1P52946 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdx1P52946 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pdx1P52946 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdx1P52946 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
Pdx1P52946 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdx1P52946 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.96□□□□□ -0.18
Pdx1P52946 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Pdx1P52946 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pdx1P52946 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.95□□□□□ -0.18
Pdx1P52946 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pdx1P52946 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Pdx1P52946 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.95□□□□□ -0.18
Pdx1P52946 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.95□□□□□ -0.18
Pdx1P52946 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pdx1P52946 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Gm13453-201ENSMUST00000118708 357 ntBASIC13.95□□□□□ -0.18
Pdx1P52946 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pdx1P52946 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.95□□□□□ -0.18
Pdx1P52946 Gm44344-201ENSMUST00000200287 129 ntBASIC13.95□□□□□ -0.18
Pdx1P52946 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.95□□□□□ -0.18
Pdx1P52946 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.95□□□□□ -0.18
Pdx1P52946 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pdx1P52946 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pdx1P52946 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.94□□□□□ -0.18
Pdx1P52946 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Pdx1P52946 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.94□□□□□ -0.18
Pdx1P52946 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pdx1P52946 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pdx1P52946 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.94□□□□□ -0.18
Pdx1P52946 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pdx1P52946 Gm15653-201ENSMUST00000119247 907 ntBASIC13.94□□□□□ -0.18
Pdx1P52946 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.94□□□□□ -0.18
Pdx1P52946 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Gm27680-201ENSMUST00000184192 160 ntBASIC13.94□□□□□ -0.18
Pdx1P52946 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.94□□□□□ -0.18
Pdx1P52946 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.94□□□□□ -0.18
Pdx1P52946 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.94□□□□□ -0.18
Pdx1P52946 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pdx1P52946 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.94□□□□□ -0.18
Pdx1P52946 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pdx1P52946 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pdx1P52946 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pdx1P52946 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pdx1P52946 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pdx1P52946 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pdx1P52946 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
Pdx1P52946 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Pdx1P52946 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.93□□□□□ -0.18
Pdx1P52946 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pdx1P52946 Gm14767-201ENSMUST00000121559 586 ntBASIC13.93□□□□□ -0.18
Pdx1P52946 Gm43703-201ENSMUST00000200523 763 ntBASIC13.93□□□□□ -0.18
Pdx1P52946 Gm44872-201ENSMUST00000207864 420 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms