Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
GdnfP48540 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GdnfP48540 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
GdnfP48540 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.37□□□□□ -0.43
GdnfP48540 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.37□□□□□ -0.43
GdnfP48540 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.37□□□□□ -0.43
GdnfP48540 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
GdnfP48540 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
GdnfP48540 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.36□□□□□ -0.43
GdnfP48540 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
GdnfP48540 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
GdnfP48540 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC12.36□□□□□ -0.43
GdnfP48540 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.36□□□□□ -0.43
GdnfP48540 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.36□□□□□ -0.43
GdnfP48540 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
GdnfP48540 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.36□□□□□ -0.43
GdnfP48540 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.36□□□□□ -0.43
GdnfP48540 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.36□□□□□ -0.43
GdnfP48540 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.36□□□□□ -0.43
GdnfP48540 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.36□□□□□ -0.43
GdnfP48540 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.36□□□□□ -0.43
GdnfP48540 Grk6-205ENSMUST00000224653 2976 ntBASIC12.36□□□□□ -0.43
GdnfP48540 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.36□□□□□ -0.43
GdnfP48540 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.36□□□□□ -0.43
GdnfP48540 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
GdnfP48540 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.36□□□□□ -0.43
GdnfP48540 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.36□□□□□ -0.43
GdnfP48540 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.36□□□□□ -0.43
GdnfP48540 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
GdnfP48540 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
GdnfP48540 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
GdnfP48540 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
GdnfP48540 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
GdnfP48540 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.35□□□□□ -0.43
GdnfP48540 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.35□□□□□ -0.43
GdnfP48540 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.35□□□□□ -0.43
GdnfP48540 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.35□□□□□ -0.43
GdnfP48540 Thap2-203ENSMUST00000218989 527 ntBASIC12.35□□□□□ -0.43
GdnfP48540 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.35□□□□□ -0.43
GdnfP48540 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.35□□□□□ -0.43
GdnfP48540 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
GdnfP48540 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms