Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx2P48379 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx2P48379 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx2P48379 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.8□□□□□ -0.04
Rfx2P48379 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Rfx2P48379 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Rfx2P48379 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.8□□□□□ -0.04
Rfx2P48379 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx2P48379 AA619741-201ENSMUST00000195095 646 ntBASIC14.8□□□□□ -0.04
Rfx2P48379 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx2P48379 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx2P48379 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.8□□□□□ -0.04
Rfx2P48379 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.8□□□□□ -0.04
Rfx2P48379 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx2P48379 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx2P48379 Matn2-206ENSMUST00000228570 2798 ntBASIC14.8□□□□□ -0.04
Rfx2P48379 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Rfx2P48379 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx2P48379 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rfx2P48379 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rfx2P48379 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.8□□□□□ -0.04
Rfx2P48379 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.8□□□□□ -0.04
Rfx2P48379 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.79□□□□□ -0.04
Rfx2P48379 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.79□□□□□ -0.04
Rfx2P48379 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rfx2P48379 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rfx2P48379 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfx2P48379 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.79□□□□□ -0.04
Rfx2P48379 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Gm24694-201ENSMUST00000180054 110 ntBASIC14.79□□□□□ -0.04
Rfx2P48379 Gm5745-201ENSMUST00000183748 313 ntBASIC14.79□□□□□ -0.04
Rfx2P48379 Gm27663-201ENSMUST00000184839 110 ntBASIC14.79□□□□□ -0.04
Rfx2P48379 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.79□□□□□ -0.04
Rfx2P48379 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Gm44855-201ENSMUST00000205725 362 ntBASIC14.79□□□□□ -0.04
Rfx2P48379 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfx2P48379 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.79□□□□□ -0.04
Rfx2P48379 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Rfx2P48379 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.79□□□□□ -0.04
Rfx2P48379 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfx2P48379 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rfx2P48379 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rfx2P48379 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfx2P48379 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rfx2P48379 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Rfx2P48379 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.79□□□□□ -0.04
Rfx2P48379 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rfx2P48379 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
Rfx2P48379 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rfx2P48379 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Rfx2P48379 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfx2P48379 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.78□□□□□ -0.04
Rfx2P48379 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.78□□□□□ -0.04
Rfx2P48379 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Rfx2P48379 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Gm9229-201ENSMUST00000222777 126 ntBASIC14.78□□□□□ -0.04
Rfx2P48379 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rfx2P48379 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfx2P48379 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms