Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.67□□□□□ -0.06
HttP42859 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.67□□□□□ -0.06
HttP42859 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HttP42859 Gm11597-201ENSMUST00000121423 964 ntBASIC14.67□□□□□ -0.06
HttP42859 Gm29741-201ENSMUST00000192667 421 ntBASIC14.67□□□□□ -0.06
HttP42859 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HttP42859 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.66□□□□□ -0.06
HttP42859 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HttP42859 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.66□□□□□ -0.06
HttP42859 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.66□□□□□ -0.06
HttP42859 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.66□□□□□ -0.06
HttP42859 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.66□□□□□ -0.06
HttP42859 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.66□□□□□ -0.06
HttP42859 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HttP42859 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
HttP42859 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.66□□□□□ -0.06
HttP42859 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
HttP42859 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.66□□□□□ -0.06
HttP42859 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.66□□□□□ -0.06
HttP42859 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
HttP42859 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HttP42859 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.65□□□□□ -0.06
HttP42859 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.65□□□□□ -0.06
HttP42859 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.65□□□□□ -0.06
HttP42859 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
HttP42859 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HttP42859 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC14.65□□□□□ -0.06
HttP42859 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
HttP42859 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HttP42859 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.65□□□□□ -0.06
HttP42859 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.65□□□□□ -0.06
HttP42859 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
HttP42859 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HttP42859 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HttP42859 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.64□□□□□ -0.07
HttP42859 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HttP42859 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.64□□□□□ -0.07
HttP42859 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.64□□□□□ -0.07
HttP42859 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.64□□□□□ -0.07
HttP42859 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.64□□□□□ -0.07
HttP42859 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.64□□□□□ -0.07
HttP42859 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.64□□□□□ -0.07
HttP42859 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HttP42859 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HttP42859 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms