Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm5187-201ENSMUST00000117317 991 ntBASIC12.99□□□□□ -0.33
Sftpa1P35242 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.99□□□□□ -0.33
Sftpa1P35242 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.99□□□□□ -0.33
Sftpa1P35242 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sftpa1P35242 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sftpa1P35242 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sftpa1P35242 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sftpa1P35242 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sftpa1P35242 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sftpa1P35242 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sftpa1P35242 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sftpa1P35242 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sftpa1P35242 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sftpa1P35242 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sftpa1P35242 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sftpa1P35242 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Gm26464-201ENSMUST00000157094 305 ntBASIC12.98□□□□□ -0.33
Sftpa1P35242 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Gm10012-201ENSMUST00000078252 192 ntBASIC12.98□□□□□ -0.33
Sftpa1P35242 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sftpa1P35242 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Sftpa1P35242 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sftpa1P35242 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Sftpa1P35242 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.97□□□□□ -0.33
Sftpa1P35242 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.97□□□□□ -0.33
Sftpa1P35242 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Gm5370-201ENSMUST00000187187 574 ntBASIC12.97□□□□□ -0.33
Sftpa1P35242 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.97□□□□□ -0.33
Sftpa1P35242 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.97□□□□□ -0.33
Sftpa1P35242 Gm38671-201ENSMUST00000200573 130 ntBASIC12.97□□□□□ -0.33
Sftpa1P35242 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.97□□□□□ -0.33
Sftpa1P35242 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.97□□□□□ -0.33
Sftpa1P35242 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sftpa1P35242 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.97□□□□□ -0.33
Sftpa1P35242 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sftpa1P35242 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.96□□□□□ -0.33
Sftpa1P35242 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sftpa1P35242 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sftpa1P35242 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sftpa1P35242 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sftpa1P35242 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sftpa1P35242 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms