Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cd28P31041 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cd28P31041 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.44□□□□□ -0.42
Cd28P31041 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.44□□□□□ -0.42
Cd28P31041 Gm6550-201ENSMUST00000187574 993 ntBASIC12.44□□□□□ -0.42
Cd28P31041 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.44□□□□□ -0.42
Cd28P31041 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.44□□□□□ -0.42
Cd28P31041 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cd28P31041 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cd28P31041 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cd28P31041 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cd28P31041 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.43□□□□□ -0.42
Cd28P31041 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Cd28P31041 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cd28P31041 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cd28P31041 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cd28P31041 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cd28P31041 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.43□□□□□ -0.42
Cd28P31041 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.43□□□□□ -0.42
Cd28P31041 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cd28P31041 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cd28P31041 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.43□□□□□ -0.42
Cd28P31041 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.43□□□□□ -0.42
Cd28P31041 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.43□□□□□ -0.42
Cd28P31041 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.43□□□□□ -0.42
Cd28P31041 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cd28P31041 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.43□□□□□ -0.42
Cd28P31041 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cd28P31041 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd28P31041 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd28P31041 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.42□□□□□ -0.42
Cd28P31041 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms