Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.08□□□□□ -0.16
PdgfaP20033 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.08□□□□□ -0.16
PdgfaP20033 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.08□□□□□ -0.16
PdgfaP20033 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PdgfaP20033 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfaP20033 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.07□□□□□ -0.16
PdgfaP20033 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PdgfaP20033 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.07□□□□□ -0.16
PdgfaP20033 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.07□□□□□ -0.16
PdgfaP20033 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.07□□□□□ -0.16
PdgfaP20033 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PdgfaP20033 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.07□□□□□ -0.16
PdgfaP20033 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.07□□□□□ -0.16
PdgfaP20033 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PdgfaP20033 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PdgfaP20033 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PdgfaP20033 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.06□□□□□ -0.16
PdgfaP20033 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PdgfaP20033 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.06□□□□□ -0.16
PdgfaP20033 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Gm27301-201ENSMUST00000184012 127 ntBASIC14.06□□□□□ -0.16
PdgfaP20033 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.06□□□□□ -0.16
PdgfaP20033 Gm20553-201ENSMUST00000204205 844 ntBASIC14.06□□□□□ -0.16
PdgfaP20033 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.06□□□□□ -0.16
PdgfaP20033 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.06□□□□□ -0.16
PdgfaP20033 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.06□□□□□ -0.16
PdgfaP20033 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PdgfaP20033 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
PdgfaP20033 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
PdgfaP20033 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PdgfaP20033 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PdgfaP20033 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PdgfaP20033 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PdgfaP20033 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
PdgfaP20033 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms