Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.54□□□□□ -0.24
Cntn1P12960 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.54□□□□□ -0.24
Cntn1P12960 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.54□□□□□ -0.24
Cntn1P12960 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cntn1P12960 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cntn1P12960 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cntn1P12960 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cntn1P12960 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cntn1P12960 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.53□□□□□ -0.24
Cntn1P12960 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cntn1P12960 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.53□□□□□ -0.24
Cntn1P12960 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.53□□□□□ -0.24
Cntn1P12960 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.53□□□□□ -0.24
Cntn1P12960 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Cntn1P12960 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.53□□□□□ -0.24
Cntn1P12960 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cntn1P12960 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cntn1P12960 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cntn1P12960 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cntn1P12960 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cntn1P12960 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cntn1P12960 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cntn1P12960 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cntn1P12960 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cntn1P12960 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cntn1P12960 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cntn1P12960 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cntn1P12960 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cntn1P12960 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cntn1P12960 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cntn1P12960 Gm15393-201ENSMUST00000120499 219 ntBASIC13.52□□□□□ -0.25
Cntn1P12960 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.52□□□□□ -0.25
Cntn1P12960 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cntn1P12960 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Cntn1P12960 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cntn1P12960 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cntn1P12960 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cntn1P12960 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Cntn1P12960 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cntn1P12960 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cntn1P12960 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cntn1P12960 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.52□□□□□ -0.25
Cntn1P12960 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cntn1P12960 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.52□□□□□ -0.25
Cntn1P12960 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cntn1P12960 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cntn1P12960 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cntn1P12960 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.51□□□□□ -0.25
Cntn1P12960 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cntn1P12960 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cntn1P12960 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cntn1P12960 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.51□□□□□ -0.25
Cntn1P12960 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.51□□□□□ -0.25
Cntn1P12960 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.51□□□□□ -0.25
Cntn1P12960 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cntn1P12960 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.51□□□□□ -0.25
Cntn1P12960 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.51□□□□□ -0.25
Cntn1P12960 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.51□□□□□ -0.25
Cntn1P12960 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Cntn1P12960 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cntn1P12960 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.51□□□□□ -0.25
Cntn1P12960 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms