Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ApoeP08226 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.36□□□□□ -0.27
ApoeP08226 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.36□□□□□ -0.27
ApoeP08226 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.36□□□□□ -0.27
ApoeP08226 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.36□□□□□ -0.27
ApoeP08226 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Birc2-201ENSMUST00000054878 378 ntBASIC13.36□□□□□ -0.27
ApoeP08226 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ApoeP08226 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ApoeP08226 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
ApoeP08226 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
ApoeP08226 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ApoeP08226 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.35□□□□□ -0.27
ApoeP08226 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Gm27459-201ENSMUST00000184860 107 ntBASIC13.35□□□□□ -0.27
ApoeP08226 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.35□□□□□ -0.27
ApoeP08226 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.35□□□□□ -0.27
ApoeP08226 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.35□□□□□ -0.27
ApoeP08226 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ApoeP08226 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.35□□□□□ -0.27
ApoeP08226 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ApoeP08226 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ApoeP08226 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.34□□□□□ -0.27
ApoeP08226 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
ApoeP08226 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ApoeP08226 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
ApoeP08226 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ApoeP08226 Gm7153-201ENSMUST00000117092 455 ntBASIC13.34□□□□□ -0.27
ApoeP08226 Gm16198-201ENSMUST00000118766 670 ntBASIC13.34□□□□□ -0.27
ApoeP08226 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.34□□□□□ -0.27
ApoeP08226 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
ApoeP08226 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
ApoeP08226 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
ApoeP08226 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.34□□□□□ -0.27
ApoeP08226 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.34□□□□□ -0.27
ApoeP08226 Gm27300-201ENSMUST00000184085 97 ntBASIC13.34□□□□□ -0.27
ApoeP08226 Gm27335-201ENSMUST00000184758 97 ntBASIC13.34□□□□□ -0.27
ApoeP08226 Mir7071-201ENSMUST00000184847 69 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms