Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.58□□□□□ -0.4
P06344 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.58□□□□□ -0.4
P06344 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
P06344 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.58□□□□□ -0.4
P06344 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Gm6916-202ENSMUST00000205523 195 ntBASIC12.58□□□□□ -0.4
P06344 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.58□□□□□ -0.4
P06344 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.58□□□□□ -0.4
P06344 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.58□□□□□ -0.4
P06344 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
P06344 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.58□□□□□ -0.4
P06344 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
P06344 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
P06344 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06344 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.58□□□□□ -0.4
P06344 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
P06344 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
P06344 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.57□□□□□ -0.4
P06344 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.57□□□□□ -0.4
P06344 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.57□□□□□ -0.4
P06344 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.57□□□□□ -0.4
P06344 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
P06344 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
P06344 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
P06344 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.57□□□□□ -0.4
P06344 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.57□□□□□ -0.4
P06344 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.57□□□□□ -0.4
P06344 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
P06344 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
P06344 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
P06344 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P06344 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.56□□□□□ -0.4
P06344 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P06344 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P06344 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms