Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
PdgfrbP05622 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
PdgfrbP05622 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.27□□□□□ -0.12
PdgfrbP05622 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
PdgfrbP05622 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.27□□□□□ -0.12
PdgfrbP05622 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PdgfrbP05622 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PdgfrbP05622 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
PdgfrbP05622 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PdgfrbP05622 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PdgfrbP05622 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
PdgfrbP05622 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.27□□□□□ -0.12
PdgfrbP05622 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.27□□□□□ -0.12
PdgfrbP05622 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.27□□□□□ -0.12
PdgfrbP05622 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PdgfrbP05622 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.27□□□□□ -0.13
PdgfrbP05622 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.27□□□□□ -0.13
PdgfrbP05622 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.27□□□□□ -0.13
PdgfrbP05622 Dupd1-202ENSMUST00000224735 548 ntBASIC14.27□□□□□ -0.13
PdgfrbP05622 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
PdgfrbP05622 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PdgfrbP05622 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PdgfrbP05622 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.26□□□□□ -0.13
PdgfrbP05622 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.26□□□□□ -0.13
PdgfrbP05622 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.26□□□□□ -0.13
PdgfrbP05622 Gm15693-201ENSMUST00000120470 637 ntBASIC14.26□□□□□ -0.13
PdgfrbP05622 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.26□□□□□ -0.13
PdgfrbP05622 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Gm28630-201ENSMUST00000187806 498 ntBASIC14.26□□□□□ -0.13
PdgfrbP05622 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PdgfrbP05622 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PdgfrbP05622 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.25□□□□□ -0.13
PdgfrbP05622 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PdgfrbP05622 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PdgfrbP05622 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.25□□□□□ -0.13
PdgfrbP05622 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PdgfrbP05622 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PdgfrbP05622 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
PdgfrbP05622 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.25□□□□□ -0.13
PdgfrbP05622 Gm24543-201ENSMUST00000103867 82 ntBASIC14.25□□□□□ -0.13
PdgfrbP05622 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.25□□□□□ -0.13
PdgfrbP05622 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PdgfrbP05622 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms