Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CcnkO88874 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CcnkO88874 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CcnkO88874 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CcnkO88874 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CcnkO88874 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CcnkO88874 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CcnkO88874 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.59□□□□□ -0.39
CcnkO88874 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CcnkO88874 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CcnkO88874 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CcnkO88874 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
CcnkO88874 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CcnkO88874 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
CcnkO88874 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CcnkO88874 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.58□□□□□ -0.4
CcnkO88874 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
CcnkO88874 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CcnkO88874 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CcnkO88874 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.58□□□□□ -0.4
CcnkO88874 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.58□□□□□ -0.4
CcnkO88874 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.58□□□□□ -0.4
CcnkO88874 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.58□□□□□ -0.4
CcnkO88874 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.58□□□□□ -0.4
CcnkO88874 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.58□□□□□ -0.4
CcnkO88874 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.58□□□□□ -0.4
CcnkO88874 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.58□□□□□ -0.4
CcnkO88874 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CcnkO88874 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CcnkO88874 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CcnkO88874 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.58□□□□□ -0.4
CcnkO88874 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CcnkO88874 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.57□□□□□ -0.4
CcnkO88874 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.57□□□□□ -0.4
CcnkO88874 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CcnkO88874 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.57□□□□□ -0.4
CcnkO88874 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.57□□□□□ -0.4
CcnkO88874 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.57□□□□□ -0.4
CcnkO88874 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.57□□□□□ -0.4
CcnkO88874 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
CcnkO88874 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.57□□□□□ -0.4
CcnkO88874 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CcnkO88874 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CcnkO88874 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CcnkO88874 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CcnkO88874 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CcnkO88874 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms