Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.76■□□□□ 0.27
Smarce1O54941 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Smarce1O54941 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.76■□□□□ 0.27
Smarce1O54941 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Smarce1O54941 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smarce1O54941 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.76■□□□□ 0.27
Smarce1O54941 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarce1O54941 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.76■□□□□ 0.27
Smarce1O54941 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Smarce1O54941 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Smarce1O54941 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Gm15957-201ENSMUST00000118893 974 ntBASIC16.75■□□□□ 0.27
Smarce1O54941 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Gm5364-201ENSMUST00000216789 889 ntBASIC16.75■□□□□ 0.27
Smarce1O54941 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.75■□□□□ 0.27
Smarce1O54941 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.75■□□□□ 0.27
Smarce1O54941 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Smarce1O54941 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.75■□□□□ 0.27
Smarce1O54941 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Smarce1O54941 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarce1O54941 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Smarce1O54941 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smarce1O54941 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.74■□□□□ 0.27
Smarce1O54941 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.74■□□□□ 0.27
Smarce1O54941 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.74■□□□□ 0.27
Smarce1O54941 Gm11025-201ENSMUST00000140773 466 ntBASIC16.74■□□□□ 0.27
Smarce1O54941 Mir3113-201ENSMUST00000175478 76 ntBASIC16.74■□□□□ 0.27
Smarce1O54941 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.74■□□□□ 0.27
Smarce1O54941 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.74■□□□□ 0.27
Smarce1O54941 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smarce1O54941 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Smarce1O54941 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.74■□□□□ 0.27
Smarce1O54941 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.74■□□□□ 0.27
Smarce1O54941 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smarce1O54941 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarce1O54941 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.74■□□□□ 0.27
Smarce1O54941 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.73■□□□□ 0.27
Smarce1O54941 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Smarce1O54941 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarce1O54941 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.73■□□□□ 0.27
Smarce1O54941 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.73■□□□□ 0.27
Smarce1O54941 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.73■□□□□ 0.27
Smarce1O54941 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.73■□□□□ 0.27
Smarce1O54941 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.73■□□□□ 0.27
Smarce1O54941 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms