Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.29□□□□□ -0.28
Cx3cl1O35188 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.28□□□□□ -0.28
Cx3cl1O35188 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.28□□□□□ -0.28
Cx3cl1O35188 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.28□□□□□ -0.28
Cx3cl1O35188 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Gm13223-201ENSMUST00000118609 747 ntBASIC13.28□□□□□ -0.28
Cx3cl1O35188 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Dupd1-202ENSMUST00000224735 548 ntBASIC13.28□□□□□ -0.28
Cx3cl1O35188 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.28□□□□□ -0.28
Cx3cl1O35188 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 BC001981-202ENSMUST00000191393 1545 ntBASIC13.28□□□□□ -0.28
Cx3cl1O35188 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.28□□□□□ -0.28
Cx3cl1O35188 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cx3cl1O35188 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cl1O35188 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cl1O35188 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cl1O35188 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cx3cl1O35188 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cl1O35188 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.27□□□□□ -0.28
Cx3cl1O35188 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cl1O35188 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cl1O35188 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cl1O35188 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cx3cl1O35188 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Cx3cl1O35188 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Gm13453-201ENSMUST00000118708 357 ntBASIC13.27□□□□□ -0.29
Cx3cl1O35188 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Shd-206ENSMUST00000225145 998 ntBASIC13.27□□□□□ -0.29
Cx3cl1O35188 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.27□□□□□ -0.29
Cx3cl1O35188 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Mir125a-201ENSMUST00000083545 68 ntBASIC13.27□□□□□ -0.29
Cx3cl1O35188 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cx3cl1O35188 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Cx3cl1O35188 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms