Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Mir125a-201ENSMUST00000083545 68 ntBASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
R3hdm1E9Q9Q2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Mir1247-201ENSMUST00000116706 82 ntBASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Gm42693-201ENSMUST00000196779 631 ntBASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
R3hdm1E9Q9Q2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Gm8062-201ENSMUST00000139696 444 ntBASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Gm5354-201ENSMUST00000182417 973 ntBASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Olfr582-201ENSMUST00000098212 960 ntBASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
R3hdm1E9Q9Q2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
R3hdm1E9Q9Q2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms