Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Gm6023-201ENSMUST00000118217 606 ntBASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Mir5132-201ENSMUST00000175166 71 ntBASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC19.48■□□□□ 0.71
Hfm1D3Z4R1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Gm2445-201ENSMUST00000182798 989 ntBASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Gm27320-201ENSMUST00000184892 109 ntBASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Gm21769-201ENSMUST00000211922 111 ntBASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 CT573034.1-201ENSMUST00000222983 313 ntBASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Gm11960-202ENSMUST00000181063 2858 ntBASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hfm1D3Z4R1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Gm13297-201ENSMUST00000120205 934 ntBASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Gm2383-201ENSMUST00000181461 807 ntBASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Gm3756-201ENSMUST00000169182 1355 ntBASIC19.46■□□□□ 0.71
Hfm1D3Z4R1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Gm9431-201ENSMUST00000119765 1051 ntBASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Gm11591-201ENSMUST00000120063 702 ntBASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Gm18753-201ENSMUST00000201000 566 ntBASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Mir433-201ENSMUST00000093564 124 ntBASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hfm1D3Z4R1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Gm14381-201ENSMUST00000122105 414 ntBASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Gm18630-201ENSMUST00000222109 1397 ntBASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Efs-202ENSMUST00000227037 2540 ntBASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hfm1D3Z4R1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms