Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col4a6B1AVK5 Gm6023-201ENSMUST00000118217 606 ntBASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Gm15808-201ENSMUST00000119046 604 ntBASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.23□□□□□ -0.13
Col4a6B1AVK5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Gm38144-201ENSMUST00000192790 465 ntBASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col4a6B1AVK5 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.22□□□□□ -0.13
Col4a6B1AVK5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col4a6B1AVK5 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Gm12241-201ENSMUST00000118330 726 ntBASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Gm16379-201ENSMUST00000161469 348 ntBASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Gm6621-201ENSMUST00000193251 772 ntBASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Gm8762-201ENSMUST00000193486 339 ntBASIC14.21□□□□□ -0.13
Col4a6B1AVK5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col4a6B1AVK5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms