Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Chd3B1AR17 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chd3B1AR17 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Chd3B1AR17 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chd3B1AR17 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.79□□□□□ -0.2
Chd3B1AR17 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Chd3B1AR17 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.79□□□□□ -0.2
Chd3B1AR17 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Chd3B1AR17 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chd3B1AR17 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.78□□□□□ -0.2
Chd3B1AR17 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.78□□□□□ -0.2
Chd3B1AR17 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.78□□□□□ -0.2
Chd3B1AR17 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.78□□□□□ -0.2
Chd3B1AR17 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Gm4804-201ENSMUST00000182234 999 ntBASIC13.78□□□□□ -0.2
Chd3B1AR17 Gm2495-201ENSMUST00000191160 466 ntBASIC13.78□□□□□ -0.2
Chd3B1AR17 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.78□□□□□ -0.2
Chd3B1AR17 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.78□□□□□ -0.2
Chd3B1AR17 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chd3B1AR17 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.77□□□□□ -0.2
Chd3B1AR17 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chd3B1AR17 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chd3B1AR17 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chd3B1AR17 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Chd3B1AR17 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Chd3B1AR17 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chd3B1AR17 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.77□□□□□ -0.2
Chd3B1AR17 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Chd3B1AR17 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Chd3B1AR17 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
Chd3B1AR17 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Chd3B1AR17 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.77□□□□□ -0.21
Chd3B1AR17 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.77□□□□□ -0.21
Chd3B1AR17 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.77□□□□□ -0.21
Chd3B1AR17 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Chd3B1AR17 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.77□□□□□ -0.21
Chd3B1AR17 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chd3B1AR17 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms