Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm8652-201ENSMUST00000181363 964 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm18905-201ENSMUST00000205454 928 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm9823-201ENSMUST00000051212 327 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Col6a4A2AX52 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.89□□□□□ -0.51
Col6a4A2AX52 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a4A2AX52 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.88□□□□□ -0.51
Col6a4A2AX52 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.88□□□□□ -0.51
Col6a4A2AX52 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Gm9182-201ENSMUST00000217829 639 ntBASIC11.88□□□□□ -0.51
Col6a4A2AX52 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.88□□□□□ -0.51
Col6a4A2AX52 Gm27514-201ENSMUST00000183692 110 ntBASIC11.88□□□□□ -0.51
Col6a4A2AX52 Gm27486-201ENSMUST00000184923 80 ntBASIC11.88□□□□□ -0.51
Col6a4A2AX52 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Gm45930-201ENSMUST00000221330 292 ntBASIC11.88□□□□□ -0.51
Col6a4A2AX52 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.88□□□□□ -0.51
Col6a4A2AX52 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.88□□□□□ -0.51
Col6a4A2AX52 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a4A2AX52 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm15460-201ENSMUST00000118147 391 ntBASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm24644-201ENSMUST00000157114 139 ntBASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm10275-202ENSMUST00000168697 495 ntBASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm9726-201ENSMUST00000180321 678 ntBASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm43179-201ENSMUST00000198797 275 ntBASIC11.87□□□□□ -0.51
Col6a4A2AX52 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm10275-201ENSMUST00000092620 635 ntBASIC11.87□□□□□ -0.51
Col6a4A2AX52 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a4A2AX52 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms