Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
H2afb3S4R1G7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Gm10275-202ENSMUST00000168697 495 ntBASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Gm5364-201ENSMUST00000216789 889 ntBASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Gm10275-201ENSMUST00000092620 635 ntBASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
H2afb3S4R1G7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.71□□□□□ -0.37
H2afb3S4R1G7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Gm15427-201ENSMUST00000117288 531 ntBASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.71□□□□□ -0.37
H2afb3S4R1G7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Rpph1-201ENSMUST00000175096 319 ntBASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Gm27741-201ENSMUST00000185060 237 ntBASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
H2afb3S4R1G7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
H2afb3S4R1G7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H2afb3S4R1G7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H2afb3S4R1G7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
H2afb3S4R1G7 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
H2afb3S4R1G7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
H2afb3S4R1G7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb3S4R1G7 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb3S4R1G7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
H2afb3S4R1G7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb3S4R1G7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb3S4R1G7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb3S4R1G7 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
H2afb3S4R1G7 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.7□□□□□ -0.38
H2afb3S4R1G7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
H2afb3S4R1G7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms