Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Gm12341-201ENSMUST00000119724 503 ntBASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Gm8927-201ENSMUST00000181978 981 ntBASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Gm3222-201ENSMUST00000071282 990 ntBASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smarcb1Q9Z0H3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Gm11478-201ENSMUST00000117851 599 ntBASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Mir7654-201ENSMUST00000185082 70 ntBASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Gm45384-201ENSMUST00000210451 277 ntBASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smarcb1Q9Z0H3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Gm11918-201ENSMUST00000121660 179 ntBASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Smarcb1Q9Z0H3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smarcb1Q9Z0H3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms