Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Gm12091-201ENSMUST00000146791 830 ntBASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scn8aQ9WTU3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Gm24420-201ENSMUST00000176676 59 ntBASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Gm43094-201ENSMUST00000196549 921 ntBASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scn8aQ9WTU3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Gm6983-201ENSMUST00000214912 628 ntBASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.11□□□□□ -0.15
Scn8aQ9WTU3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Gm11918-201ENSMUST00000121660 179 ntBASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn8aQ9WTU3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms