Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Gm45098-201ENSMUST00000207179 657 ntBASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chaf1aQ9QWF0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
Chaf1aQ9QWF0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chaf1aQ9QWF0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chaf1aQ9QWF0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chaf1aQ9QWF0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Chaf1aQ9QWF0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Chaf1aQ9QWF0 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Chaf1aQ9QWF0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chaf1aQ9QWF0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Gm5479-201ENSMUST00000160578 435 ntBASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chaf1aQ9QWF0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.81■□□□□ 0.12
Chaf1aQ9QWF0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms