Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tube1Q9D6T1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tube1Q9D6T1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tube1Q9D6T1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Mir1897-201ENSMUST00000122581 272 ntBASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Gm9182-201ENSMUST00000217829 639 ntBASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Gm5186-201ENSMUST00000218781 920 ntBASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Tube1Q9D6T1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tube1Q9D6T1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Tube1Q9D6T1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.71■□□□□ 0.1
Tube1Q9D6T1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tube1Q9D6T1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tube1Q9D6T1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Gm16215-201ENSMUST00000161990 637 ntBASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Gm27838-201ENSMUST00000184829 128 ntBASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Gm7730-201ENSMUST00000212486 454 ntBASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Dupd1-202ENSMUST00000224735 548 ntBASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Matn2-206ENSMUST00000228570 2798 ntBASIC15.7■□□□□ 0.1
Tube1Q9D6T1 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Gm37230-201ENSMUST00000194491 818 ntBASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tube1Q9D6T1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms