Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gm8584-201ENSMUST00000171982 758 ntBASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gm7230-201ENSMUST00000173026 815 ntBASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chaf1bQ9D0N7 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Chaf1bQ9D0N7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chaf1bQ9D0N7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms